📃 Publications

Generalized reporter score-based enrichment analysis for omics data
Longitudinal profiling of the microbiome at four body sites reveals core stability and individualized dynamics during health and disease
Semi-supervised Cooperative Learning for Multiomics Data Fusion
Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP)
Organism-wide, cell-type-specific secretome mapping of exercise training in mice
Multi-omics microsampling for the profiling of lifestyle-associated changes in health
State-of-the-art methods for exposure-health studies: Results from the exposome data challenge event
Multiomic analysis reveals cell-type-specific molecular determinants of COVID-19 severity
Deep learning-based pseudo-mass spectrometry imaging analysis for precision medicine
TidyMass an object-oriented reproducible analysis framework for LC–MS data
Longitudinal Urine Metabolic Profiling and Gestational Age Prediction in Pregnancy
Precision environmental health monitoring by longitudinal exposome and multi-omics profiling
Longitudinal interactions between levels of serum cytokine and the microbiome from four body sites
metID: an R package for automatable compound annotation for LC− MS-based data
Common and rare variant analyses combined with single-cell multiomics reveal cell-type-specific molecular mechanisms of COVID-19 severity
Integration and comparison of multi-omics profiles of NGLY1 deficiency plasma and cellular models to identify clinically relevant molecular phenotypes
A serum metabolomics analysis reveals a panel of screening metabolic biomarkers for esophageal squamous cell carcinoma
The mediation effect of serum metabolites on the relationship between long-term smoking exposure and esophageal squamous cell carcinoma
Serum metabolomics analysis for the progression of esophageal squamous cell carcinoma
Metabolic dynamics and prediction of gestational age and time to delivery in pregnant women
Metabolic reaction network-based recursive metabolite annotation for untargeted metabolomics
Development of a correlative strategy to discover colorectal tumor tissue derived metabolite biomarkers in plasma using untargeted metabolomics
Predicting the pathological response to neoadjuvant chemoradiation using untargeted metabolomics in locally advanced rectal cancer
Serum metabolomics for early diagnosis of esophageal squamous cell carcinoma by UHPLC-QTOF/MS
Normalization and integration of large-scale metabolomics data using support vector regression