Introduction & Installation

metID is a R package which can be used for in-hosue MS2 database construction, and metabolite identification based on in-house and public MS1 and MS2 database.

if(!require(devtools)){
install.packages("devtools")
}
devtools::install_github("jaspershen/metID")
##tinyTools is a dependent package for metID
devtools::install_github("jaspershen/tinyTools")

All the demo data for metID are from demoData, so please install it first.

devtools::install_github("jaspershen/demoData")

Database construction

We have provide some public databases and our in-house databases, so if you want to use them, please refer this article, Database provided for metID.
metID package also has some usefull tools, please refer to this article, Other tools in metID